Mercurial > emacs
annotate lisp/org/ob-sql.el @ 112270:cc0887b67703
Merge from emacs-23 branch, up to r100382.
Note:
emacs-23 r100373 is rendered unnecessary by pre-existing 2010-05-20
trunk change.
author | Glenn Morris <rgm@gnu.org> |
---|---|
date | Sat, 15 Jan 2011 12:38:27 -0800 |
parents | a7740098b594 |
children | 6378d1b57038 |
rev | line source |
---|---|
109462
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
1 ;;; ob-sql.el --- org-babel functions for sql evaluation |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
2 |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
3 ;; Copyright (C) 2009, 2010 Free Software Foundation, Inc. |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
4 |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
5 ;; Author: Eric Schulte |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
6 ;; Keywords: literate programming, reproducible research |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
7 ;; Homepage: http://orgmode.org |
111880
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
8 ;; Version: 7.4 |
109462
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
9 |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
10 ;; This file is part of GNU Emacs. |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
11 |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
12 ;; GNU Emacs is free software: you can redistribute it and/or modify |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
13 ;; it under the terms of the GNU General Public License as published by |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
14 ;; the Free Software Foundation, either version 3 of the License, or |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
15 ;; (at your option) any later version. |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
16 |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
17 ;; GNU Emacs is distributed in the hope that it will be useful, |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
18 ;; but WITHOUT ANY WARRANTY; without even the implied warranty of |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
19 ;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
20 ;; GNU General Public License for more details. |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
21 |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
22 ;; You should have received a copy of the GNU General Public License |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
23 ;; along with GNU Emacs. If not, see <http://www.gnu.org/licenses/>. |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
24 |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
25 ;;; Commentary: |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
26 |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
27 ;; Org-Babel support for evaluating sql source code. |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
28 ;; |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
29 ;; SQL is somewhat unique in that there are many different engines for |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
30 ;; the evaluation of sql (Mysql, PostgreSQL, etc...), so much of this |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
31 ;; file will have to be implemented engine by engine. |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
32 ;; |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
33 ;; Also SQL evaluation generally takes place inside of a database. |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
34 ;; |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
35 ;; For now lets just allow a generic ':cmdline' header argument. |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
36 ;; |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
37 ;; TODO: |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
38 ;; |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
39 ;; - support for sessions |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
40 ;; - add more useful header arguments (user, passwd, database, etc...) |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
41 ;; - support for more engines (currently only supports mysql) |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
42 ;; - what's a reasonable way to drop table data into SQL? |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
43 ;; |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
44 |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
45 ;;; Code: |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
46 (require 'ob) |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
47 (eval-when-compile (require 'cl)) |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
48 |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
49 (declare-function org-table-import "org-table" (file arg)) |
111880
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
50 (declare-function orgtbl-to-csv "org-table" (TABLE PARAMS)) |
109462
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
51 |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
52 (defvar org-babel-default-header-args:sql '()) |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
53 |
111880
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
54 (defun org-babel-expand-body:sql (body params) |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
55 "Expand BODY according to the values of PARAMS." |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
56 (org-babel-sql-expand-vars |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
57 body (mapcar #'cdr (org-babel-get-header params :var)))) |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
58 |
109462
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
59 (defun org-babel-execute:sql (body params) |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
60 "Execute a block of Sql code with Babel. |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
61 This function is called by `org-babel-execute-src-block'." |
111506
5cb272c831e8
Install org-mode version 7.3
Carsten Dominik <carsten.dominik@gmail.com>
parents:
109462
diff
changeset
|
62 (let* ((result-params (cdr (assoc :result-params params))) |
109462
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
63 (cmdline (cdr (assoc :cmdline params))) |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
64 (engine (cdr (assoc :engine params))) |
111506
5cb272c831e8
Install org-mode version 7.3
Carsten Dominik <carsten.dominik@gmail.com>
parents:
109462
diff
changeset
|
65 (in-file (org-babel-temp-file "sql-in-")) |
109462
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
66 (out-file (or (cdr (assoc :out-file params)) |
111506
5cb272c831e8
Install org-mode version 7.3
Carsten Dominik <carsten.dominik@gmail.com>
parents:
109462
diff
changeset
|
67 (org-babel-temp-file "sql-out-"))) |
109462
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
68 (command (case (intern engine) |
111880
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
69 ('msosql (format "osql %s -s \"\t\" -i %s -o %s" |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
70 (or cmdline "") |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
71 (org-babel-process-file-name in-file) |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
72 (org-babel-process-file-name out-file))) |
109462
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
73 ('mysql (format "mysql %s -e \"source %s\" > %s" |
111506
5cb272c831e8
Install org-mode version 7.3
Carsten Dominik <carsten.dominik@gmail.com>
parents:
109462
diff
changeset
|
74 (or cmdline "") |
5cb272c831e8
Install org-mode version 7.3
Carsten Dominik <carsten.dominik@gmail.com>
parents:
109462
diff
changeset
|
75 (org-babel-process-file-name in-file) |
5cb272c831e8
Install org-mode version 7.3
Carsten Dominik <carsten.dominik@gmail.com>
parents:
109462
diff
changeset
|
76 (org-babel-process-file-name out-file))) |
5cb272c831e8
Install org-mode version 7.3
Carsten Dominik <carsten.dominik@gmail.com>
parents:
109462
diff
changeset
|
77 ('postgresql (format "psql -A -P footer=off -F \"\t\" -f %s -o %s %s" |
5cb272c831e8
Install org-mode version 7.3
Carsten Dominik <carsten.dominik@gmail.com>
parents:
109462
diff
changeset
|
78 (org-babel-process-file-name in-file) |
5cb272c831e8
Install org-mode version 7.3
Carsten Dominik <carsten.dominik@gmail.com>
parents:
109462
diff
changeset
|
79 (org-babel-process-file-name out-file) |
5cb272c831e8
Install org-mode version 7.3
Carsten Dominik <carsten.dominik@gmail.com>
parents:
109462
diff
changeset
|
80 (or cmdline ""))) |
109462
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
81 (t (error "no support for the %s sql engine" engine))))) |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
82 (with-temp-file in-file |
111880
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
83 (insert (org-babel-expand-body:sql body params))) |
109462
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
84 (message command) |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
85 (shell-command command) |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
86 (with-temp-buffer |
111880
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
87 (org-table-import out-file '(16)) |
109462
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
88 (org-babel-reassemble-table |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
89 (org-table-to-lisp) |
111506
5cb272c831e8
Install org-mode version 7.3
Carsten Dominik <carsten.dominik@gmail.com>
parents:
109462
diff
changeset
|
90 (org-babel-pick-name (cdr (assoc :colname-names params)) |
5cb272c831e8
Install org-mode version 7.3
Carsten Dominik <carsten.dominik@gmail.com>
parents:
109462
diff
changeset
|
91 (cdr (assoc :colnames params))) |
5cb272c831e8
Install org-mode version 7.3
Carsten Dominik <carsten.dominik@gmail.com>
parents:
109462
diff
changeset
|
92 (org-babel-pick-name (cdr (assoc :rowname-names params)) |
5cb272c831e8
Install org-mode version 7.3
Carsten Dominik <carsten.dominik@gmail.com>
parents:
109462
diff
changeset
|
93 (cdr (assoc :rownames params))))))) |
109462
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
94 |
111880
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
95 (defun org-babel-sql-expand-vars (body vars) |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
96 "Expand the variables held in VARS in BODY." |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
97 (mapc |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
98 (lambda (pair) |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
99 (setq body |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
100 (replace-regexp-in-string |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
101 (format "\$%s" (car pair)) |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
102 ((lambda (val) |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
103 (if (listp val) |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
104 ((lambda (data-file) |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
105 (with-temp-file data-file |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
106 (insert (orgtbl-to-csv |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
107 val '(:fmt (lambda (el) (if (stringp el) |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
108 el |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
109 (format "%S" el))))))) |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
110 data-file) |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
111 (org-babel-temp-file "sql-data-")) |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
112 (if (stringp val) val (format "%S" val)))) |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
113 (cdr pair)) |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
114 body))) |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
115 vars) |
a7740098b594
Update to Org mode 7.4
Carsten Dominik <carsten.dominik@gmail.com>
parents:
111506
diff
changeset
|
116 body) |
109462
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
117 |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
118 (defun org-babel-prep-session:sql (session params) |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
119 "Raise an error because Sql sessions aren't implemented." |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
120 (error "sql sessions not yet implemented")) |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
121 |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
122 (provide 'ob-sql) |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
123 |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
124 ;; arch-tag: a43ff944-6de1-4566-a83c-626814e3dad2 |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
125 |
a150e8a14679
Install version 7.01 of Org-mode
Carsten Dominik <carsten.dominik@gmail.com>
parents:
diff
changeset
|
126 ;;; ob-sql.el ends here |