annotate pca.c @ 730:eff5131d6a33 libavutil

PPC: check for x-form asm constraint support
author mru
date Sat, 18 Apr 2009 13:57:30 +0000
parents 5d344280a1f8
children 0795a743bda1
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
1 /*
633
8c48a1b999a3 spelling/grammar/consistency review part I
diego
parents: 596
diff changeset
2 * principal component analysis (PCA)
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
3 * Copyright (c) 2004 Michael Niedermayer <michaelni@gmx.at>
200789f57b62 Principal component analysis
michael
parents:
diff changeset
4 *
563
daccf2fe1053 Copy and paste LGPL from tree.h, the previous one referred to a non-existing
michael
parents: 557
diff changeset
5 * This file is part of FFmpeg.
daccf2fe1053 Copy and paste LGPL from tree.h, the previous one referred to a non-existing
michael
parents: 557
diff changeset
6 *
daccf2fe1053 Copy and paste LGPL from tree.h, the previous one referred to a non-existing
michael
parents: 557
diff changeset
7 * FFmpeg is free software; you can redistribute it and/or
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
8 * modify it under the terms of the GNU Lesser General Public
200789f57b62 Principal component analysis
michael
parents:
diff changeset
9 * License as published by the Free Software Foundation; either
563
daccf2fe1053 Copy and paste LGPL from tree.h, the previous one referred to a non-existing
michael
parents: 557
diff changeset
10 * version 2.1 of the License, or (at your option) any later version.
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
11 *
563
daccf2fe1053 Copy and paste LGPL from tree.h, the previous one referred to a non-existing
michael
parents: 557
diff changeset
12 * FFmpeg is distributed in the hope that it will be useful,
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
13 * but WITHOUT ANY WARRANTY; without even the implied warranty of
200789f57b62 Principal component analysis
michael
parents:
diff changeset
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
200789f57b62 Principal component analysis
michael
parents:
diff changeset
15 * Lesser General Public License for more details.
200789f57b62 Principal component analysis
michael
parents:
diff changeset
16 *
200789f57b62 Principal component analysis
michael
parents:
diff changeset
17 * You should have received a copy of the GNU Lesser General Public
563
daccf2fe1053 Copy and paste LGPL from tree.h, the previous one referred to a non-existing
michael
parents: 557
diff changeset
18 * License along with FFmpeg; if not, write to the Free Software
daccf2fe1053 Copy and paste LGPL from tree.h, the previous one referred to a non-existing
michael
parents: 557
diff changeset
19 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
20 */
200789f57b62 Principal component analysis
michael
parents:
diff changeset
21
200789f57b62 Principal component analysis
michael
parents:
diff changeset
22 /**
642
70bdd5501662 Use full internal pathname in doxygen @file directives.
diego
parents: 633
diff changeset
23 * @file libavutil/pca.c
633
8c48a1b999a3 spelling/grammar/consistency review part I
diego
parents: 596
diff changeset
24 * principal component analysis (PCA)
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
25 */
200789f57b62 Principal component analysis
michael
parents:
diff changeset
26
551
fe6d70cb51a6 fix includes
michael
parents: 550
diff changeset
27 #include "common.h"
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
28 #include "pca.h"
200789f57b62 Principal component analysis
michael
parents:
diff changeset
29
557
9f3f45596ecf Move context struct to c file.
michael
parents: 555
diff changeset
30 typedef struct PCA{
9f3f45596ecf Move context struct to c file.
michael
parents: 555
diff changeset
31 int count;
9f3f45596ecf Move context struct to c file.
michael
parents: 555
diff changeset
32 int n;
9f3f45596ecf Move context struct to c file.
michael
parents: 555
diff changeset
33 double *covariance;
9f3f45596ecf Move context struct to c file.
michael
parents: 555
diff changeset
34 double *mean;
9f3f45596ecf Move context struct to c file.
michael
parents: 555
diff changeset
35 }PCA;
9f3f45596ecf Move context struct to c file.
michael
parents: 555
diff changeset
36
555
2fb78abcf725 Make ff_pca_init() allocate it struct instead of letting the user provide
michael
parents: 554
diff changeset
37 PCA *ff_pca_init(int n){
2fb78abcf725 Make ff_pca_init() allocate it struct instead of letting the user provide
michael
parents: 554
diff changeset
38 PCA *pca;
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
39 if(n<=0)
555
2fb78abcf725 Make ff_pca_init() allocate it struct instead of letting the user provide
michael
parents: 554
diff changeset
40 return NULL;
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
41
555
2fb78abcf725 Make ff_pca_init() allocate it struct instead of letting the user provide
michael
parents: 554
diff changeset
42 pca= av_mallocz(sizeof(PCA));
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
43 pca->n= n;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
44 pca->count=0;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
45 pca->covariance= av_mallocz(sizeof(double)*n*n);
200789f57b62 Principal component analysis
michael
parents:
diff changeset
46 pca->mean= av_mallocz(sizeof(double)*n);
200789f57b62 Principal component analysis
michael
parents:
diff changeset
47
555
2fb78abcf725 Make ff_pca_init() allocate it struct instead of letting the user provide
michael
parents: 554
diff changeset
48 return pca;
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
49 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
50
200789f57b62 Principal component analysis
michael
parents:
diff changeset
51 void ff_pca_free(PCA *pca){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
52 av_freep(&pca->covariance);
200789f57b62 Principal component analysis
michael
parents:
diff changeset
53 av_freep(&pca->mean);
555
2fb78abcf725 Make ff_pca_init() allocate it struct instead of letting the user provide
michael
parents: 554
diff changeset
54 av_free(pca);
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
55 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
56
200789f57b62 Principal component analysis
michael
parents:
diff changeset
57 void ff_pca_add(PCA *pca, double *v){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
58 int i, j;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
59 const int n= pca->n;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
60
200789f57b62 Principal component analysis
michael
parents:
diff changeset
61 for(i=0; i<n; i++){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
62 pca->mean[i] += v[i];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
63 for(j=i; j<n; j++)
200789f57b62 Principal component analysis
michael
parents:
diff changeset
64 pca->covariance[j + i*n] += v[i]*v[j];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
65 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
66 pca->count++;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
67 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
68
200789f57b62 Principal component analysis
michael
parents:
diff changeset
69 int ff_pca(PCA *pca, double *eigenvector, double *eigenvalue){
585
0c8ca6fd0832 Initialize variable to silence the warning:
diego
parents: 563
diff changeset
70 int i, j, pass;
0c8ca6fd0832 Initialize variable to silence the warning:
diego
parents: 563
diff changeset
71 int k=0;
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
72 const int n= pca->n;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
73 double z[n];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
74
200789f57b62 Principal component analysis
michael
parents:
diff changeset
75 memset(eigenvector, 0, sizeof(double)*n*n);
200789f57b62 Principal component analysis
michael
parents:
diff changeset
76
200789f57b62 Principal component analysis
michael
parents:
diff changeset
77 for(j=0; j<n; j++){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
78 pca->mean[j] /= pca->count;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
79 eigenvector[j + j*n] = 1.0;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
80 for(i=0; i<=j; i++){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
81 pca->covariance[j + i*n] /= pca->count;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
82 pca->covariance[j + i*n] -= pca->mean[i] * pca->mean[j];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
83 pca->covariance[i + j*n] = pca->covariance[j + i*n];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
84 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
85 eigenvalue[j]= pca->covariance[j + j*n];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
86 z[j]= 0;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
87 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
88
200789f57b62 Principal component analysis
michael
parents:
diff changeset
89 for(pass=0; pass < 50; pass++){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
90 double sum=0;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
91
200789f57b62 Principal component analysis
michael
parents:
diff changeset
92 for(i=0; i<n; i++)
200789f57b62 Principal component analysis
michael
parents:
diff changeset
93 for(j=i+1; j<n; j++)
200789f57b62 Principal component analysis
michael
parents:
diff changeset
94 sum += fabs(pca->covariance[j + i*n]);
200789f57b62 Principal component analysis
michael
parents:
diff changeset
95
200789f57b62 Principal component analysis
michael
parents:
diff changeset
96 if(sum == 0){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
97 for(i=0; i<n; i++){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
98 double maxvalue= -1;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
99 for(j=i; j<n; j++){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
100 if(eigenvalue[j] > maxvalue){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
101 maxvalue= eigenvalue[j];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
102 k= j;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
103 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
104 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
105 eigenvalue[k]= eigenvalue[i];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
106 eigenvalue[i]= maxvalue;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
107 for(j=0; j<n; j++){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
108 double tmp= eigenvector[k + j*n];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
109 eigenvector[k + j*n]= eigenvector[i + j*n];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
110 eigenvector[i + j*n]= tmp;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
111 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
112 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
113 return pass;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
114 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
115
200789f57b62 Principal component analysis
michael
parents:
diff changeset
116 for(i=0; i<n; i++){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
117 for(j=i+1; j<n; j++){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
118 double covar= pca->covariance[j + i*n];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
119 double t,c,s,tau,theta, h;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
120
200789f57b62 Principal component analysis
michael
parents:
diff changeset
121 if(pass < 3 && fabs(covar) < sum / (5*n*n)) //FIXME why pass < 3
200789f57b62 Principal component analysis
michael
parents:
diff changeset
122 continue;
633
8c48a1b999a3 spelling/grammar/consistency review part I
diego
parents: 596
diff changeset
123 if(fabs(covar) == 0.0) //FIXME should not be needed
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
124 continue;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
125 if(pass >=3 && fabs((eigenvalue[j]+z[j])/covar) > (1LL<<32) && fabs((eigenvalue[i]+z[i])/covar) > (1LL<<32)){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
126 pca->covariance[j + i*n]=0.0;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
127 continue;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
128 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
129
200789f57b62 Principal component analysis
michael
parents:
diff changeset
130 h= (eigenvalue[j]+z[j]) - (eigenvalue[i]+z[i]);
200789f57b62 Principal component analysis
michael
parents:
diff changeset
131 theta=0.5*h/covar;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
132 t=1.0/(fabs(theta)+sqrt(1.0+theta*theta));
200789f57b62 Principal component analysis
michael
parents:
diff changeset
133 if(theta < 0.0) t = -t;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
134
200789f57b62 Principal component analysis
michael
parents:
diff changeset
135 c=1.0/sqrt(1+t*t);
200789f57b62 Principal component analysis
michael
parents:
diff changeset
136 s=t*c;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
137 tau=s/(1.0+c);
200789f57b62 Principal component analysis
michael
parents:
diff changeset
138 z[i] -= t*covar;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
139 z[j] += t*covar;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
140
554
29d015080b3d Do not mix declarations and statements (by ramiro).
michael
parents: 553
diff changeset
141 #define ROTATE(a,i,j,k,l) {\
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
142 double g=a[j + i*n];\
200789f57b62 Principal component analysis
michael
parents:
diff changeset
143 double h=a[l + k*n];\
200789f57b62 Principal component analysis
michael
parents:
diff changeset
144 a[j + i*n]=g-s*(h+g*tau);\
554
29d015080b3d Do not mix declarations and statements (by ramiro).
michael
parents: 553
diff changeset
145 a[l + k*n]=h+s*(g-h*tau); }
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
146 for(k=0; k<n; k++) {
200789f57b62 Principal component analysis
michael
parents:
diff changeset
147 if(k!=i && k!=j){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
148 ROTATE(pca->covariance,FFMIN(k,i),FFMAX(k,i),FFMIN(k,j),FFMAX(k,j))
200789f57b62 Principal component analysis
michael
parents:
diff changeset
149 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
150 ROTATE(eigenvector,k,i,k,j)
200789f57b62 Principal component analysis
michael
parents:
diff changeset
151 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
152 pca->covariance[j + i*n]=0.0;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
153 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
154 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
155 for (i=0; i<n; i++) {
200789f57b62 Principal component analysis
michael
parents:
diff changeset
156 eigenvalue[i] += z[i];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
157 z[i]=0.0;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
158 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
159 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
160
200789f57b62 Principal component analysis
michael
parents:
diff changeset
161 return -1;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
162 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
163
553
288f054e06e8 put testing code under #ifdef TEST
michael
parents: 552
diff changeset
164 #ifdef TEST
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
165
200789f57b62 Principal component analysis
michael
parents:
diff changeset
166 #undef printf
200789f57b62 Principal component analysis
michael
parents:
diff changeset
167 #include <stdio.h>
200789f57b62 Principal component analysis
michael
parents:
diff changeset
168 #include <stdlib.h>
701
ae6e96434bec Replace random() usage in test programs by av_lfg_*().
diego
parents: 642
diff changeset
169 #include "lfg.h"
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
170
596
11efcc64c2f6 Add missing 'void' keyword to parameterless function declarations.
diego
parents: 585
diff changeset
171 int main(void){
555
2fb78abcf725 Make ff_pca_init() allocate it struct instead of letting the user provide
michael
parents: 554
diff changeset
172 PCA *pca;
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
173 int i, j, k;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
174 #define LEN 8
200789f57b62 Principal component analysis
michael
parents:
diff changeset
175 double eigenvector[LEN*LEN];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
176 double eigenvalue[LEN];
726
5d344280a1f8 cosmetics: Rename prn variable to prng (Pseudo Random Number Generator).
diego
parents: 701
diff changeset
177 AVLFG prng;
701
ae6e96434bec Replace random() usage in test programs by av_lfg_*().
diego
parents: 642
diff changeset
178
726
5d344280a1f8 cosmetics: Rename prn variable to prng (Pseudo Random Number Generator).
diego
parents: 701
diff changeset
179 av_lfg_init(&prng, 1);
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
180
555
2fb78abcf725 Make ff_pca_init() allocate it struct instead of letting the user provide
michael
parents: 554
diff changeset
181 pca= ff_pca_init(LEN);
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
182
200789f57b62 Principal component analysis
michael
parents:
diff changeset
183 for(i=0; i<9000000; i++){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
184 double v[2*LEN+100];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
185 double sum=0;
726
5d344280a1f8 cosmetics: Rename prn variable to prng (Pseudo Random Number Generator).
diego
parents: 701
diff changeset
186 int pos = av_lfg_get(&prng) % LEN;
5d344280a1f8 cosmetics: Rename prn variable to prng (Pseudo Random Number Generator).
diego
parents: 701
diff changeset
187 int v2 = av_lfg_get(&prng) % 101 - 50;
5d344280a1f8 cosmetics: Rename prn variable to prng (Pseudo Random Number Generator).
diego
parents: 701
diff changeset
188 v[0] = av_lfg_get(&prng) % 101 - 50;
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
189 for(j=1; j<8; j++){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
190 if(j<=pos) v[j]= v[0];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
191 else v[j]= v2;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
192 sum += v[j];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
193 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
194 /* for(j=0; j<LEN; j++){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
195 v[j] -= v[pos];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
196 }*/
726
5d344280a1f8 cosmetics: Rename prn variable to prng (Pseudo Random Number Generator).
diego
parents: 701
diff changeset
197 // sum += av_lfg_get(&prng) % 10;
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
198 /* for(j=0; j<LEN; j++){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
199 v[j] -= sum/LEN;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
200 }*/
200789f57b62 Principal component analysis
michael
parents:
diff changeset
201 // lbt1(v+100,v+100,LEN);
555
2fb78abcf725 Make ff_pca_init() allocate it struct instead of letting the user provide
michael
parents: 554
diff changeset
202 ff_pca_add(pca, v);
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
203 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
204
200789f57b62 Principal component analysis
michael
parents:
diff changeset
205
555
2fb78abcf725 Make ff_pca_init() allocate it struct instead of letting the user provide
michael
parents: 554
diff changeset
206 ff_pca(pca, eigenvector, eigenvalue);
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
207 for(i=0; i<LEN; i++){
555
2fb78abcf725 Make ff_pca_init() allocate it struct instead of letting the user provide
michael
parents: 554
diff changeset
208 pca->count= 1;
2fb78abcf725 Make ff_pca_init() allocate it struct instead of letting the user provide
michael
parents: 554
diff changeset
209 pca->mean[i]= 0;
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
210
200789f57b62 Principal component analysis
michael
parents:
diff changeset
211 // (0.5^|x|)^2 = 0.5^2|x| = 0.25^|x|
200789f57b62 Principal component analysis
michael
parents:
diff changeset
212
200789f57b62 Principal component analysis
michael
parents:
diff changeset
213
200789f57b62 Principal component analysis
michael
parents:
diff changeset
214 // pca.covariance[i + i*LEN]= pow(0.5, fabs
200789f57b62 Principal component analysis
michael
parents:
diff changeset
215 for(j=i; j<LEN; j++){
555
2fb78abcf725 Make ff_pca_init() allocate it struct instead of letting the user provide
michael
parents: 554
diff changeset
216 printf("%f ", pca->covariance[i + j*LEN]);
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
217 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
218 printf("\n");
200789f57b62 Principal component analysis
michael
parents:
diff changeset
219 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
220
200789f57b62 Principal component analysis
michael
parents:
diff changeset
221 #if 1
200789f57b62 Principal component analysis
michael
parents:
diff changeset
222 for(i=0; i<LEN; i++){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
223 double v[LEN];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
224 double error=0;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
225 memset(v, 0, sizeof(v));
200789f57b62 Principal component analysis
michael
parents:
diff changeset
226 for(j=0; j<LEN; j++){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
227 for(k=0; k<LEN; k++){
555
2fb78abcf725 Make ff_pca_init() allocate it struct instead of letting the user provide
michael
parents: 554
diff changeset
228 v[j] += pca->covariance[FFMIN(k,j) + FFMAX(k,j)*LEN] * eigenvector[i + k*LEN];
550
200789f57b62 Principal component analysis
michael
parents:
diff changeset
229 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
230 v[j] /= eigenvalue[i];
200789f57b62 Principal component analysis
michael
parents:
diff changeset
231 error += fabs(v[j] - eigenvector[i + j*LEN]);
200789f57b62 Principal component analysis
michael
parents:
diff changeset
232 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
233 printf("%f ", error);
200789f57b62 Principal component analysis
michael
parents:
diff changeset
234 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
235 printf("\n");
200789f57b62 Principal component analysis
michael
parents:
diff changeset
236 #endif
200789f57b62 Principal component analysis
michael
parents:
diff changeset
237 for(i=0; i<LEN; i++){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
238 for(j=0; j<LEN; j++){
200789f57b62 Principal component analysis
michael
parents:
diff changeset
239 printf("%9.6f ", eigenvector[i + j*LEN]);
200789f57b62 Principal component analysis
michael
parents:
diff changeset
240 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
241 printf(" %9.1f %f\n", eigenvalue[i], eigenvalue[i]/eigenvalue[0]);
200789f57b62 Principal component analysis
michael
parents:
diff changeset
242 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
243
200789f57b62 Principal component analysis
michael
parents:
diff changeset
244 return 0;
200789f57b62 Principal component analysis
michael
parents:
diff changeset
245 }
200789f57b62 Principal component analysis
michael
parents:
diff changeset
246 #endif