Enable -subfps for time based subtitles, too. Please update the DOCS for -subfps: "If you have time-based subtitles like subviewer that can't be synced by -subdelay try specifying -subfps with the framerate of the movie the time-based sub was created for, eg. -subfps 25 if you use subs from a 25 fps movie with a movie using a different framerate. If you need to guess -subfps, try 25, 23.98 and 29.97"